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LOC127299840 cellulose synthase A catalytic subunit 7 [UDP-forming] [ Lolium perenne ]

Gene ID: 127299840, updated on 23-Nov-2023

Summary

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Gene symbol
LOC127299840
Gene description
cellulose synthase A catalytic subunit 7 [UDP-forming]
Gene type
protein coding
RefSeq status
MODEL
Organism
Lolium perenne
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Pooideae; Poodae; Poeae; Poeae Chloroplast Group 2 (Poeae type); Loliodinae; Loliinae; Lolium
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Genomic context

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See LOC127299840 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
8
Annotation release Status Assembly Chr Location
100 current MPB_Lper_Kyuss_1697 (GCF_019359855.1) 1 NC_067244.1 (96651726..96655859)

Chromosome 1 - NC_067244.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC127348796 Neighboring gene eukaryotic translation initiation factor Neighboring gene transfer RNA glycine (anticodon GCC) Neighboring gene F-box protein PP2-B11-like Neighboring gene uncharacterized LOC127299859

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_067244.1 Chromosome 1 Reference MPB_Lper_Kyuss_1697

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De novo assembly of the perennial ryegrass transcriptome using an RNA-Seq strategy. Farrell JD, et al. PLoS One, 2014. PMID 25126744, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cellulose synthase (UDP-forming) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cellulose biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in plant-type primary cell wall biogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in trans-Golgi network IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cellulose synthase A catalytic subunit 7 [UDP-forming]

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Lolium perenne Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference MPB_Lper_Kyuss_1697

Genomic

  1. NC_067244.1 Reference MPB_Lper_Kyuss_1697

    Range
    96651726..96655859
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_051329881.1 → XP_051185841.1  cellulose synthase A catalytic subunit 7 [UDP-forming]

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases