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LOC127263013 probable beta-1,4-xylosyltransferase IRX10L [ Andrographis paniculata ]

Gene ID: 127263013, updated on 23-Nov-2023

Summary

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Gene symbol
LOC127263013
Gene description
probable beta-1,4-xylosyltransferase IRX10L
Gene type
protein coding
RefSeq status
MODEL
Organism
Andrographis paniculata
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Acanthaceae; Acanthoideae; Andrographideae; Andrographis
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Genomic context

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See LOC127263013 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
100 current ASM980555v1 (GCF_009805555.1) Unplaced Scaffold NW_026137602.1 (3403031..3407734, complement)

NW_026137602.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC127263155 Neighboring gene calcium-dependent mitochondrial ATP-magnesium/phosphate carrier protein 2 Neighboring gene uncharacterized LOC127263014 Neighboring gene uncharacterized LOC127263066 Neighboring gene floricaula protein Neighboring gene glycine--tRNA ligase, mitochondrial 1-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_026137602 Unplaced Scaffold Reference ASM980555v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 1,4-beta-D-xylan synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables glucuronoxylan glucuronosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glucuronoxylan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in plant-type secondary cell wall biogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable beta-1,4-xylosyltransferase IRX10L

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Andrographis paniculata Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM980555v1 Primary Assembly

Genomic

  1. NW_026137602.1 Reference ASM980555v1 Primary Assembly

    Range
    3403031..3407734 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_051291928.1 → XP_051147885.1  probable beta-1,4-xylosyltransferase IRX10L

  2. XM_051291927.1 → XP_051147884.1  probable beta-1,4-xylosyltransferase IRX10L

  3. XM_051291926.1 → XP_051147883.1  probable beta-1,4-xylosyltransferase IRX10L

RNA

  1. XR_007841358.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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