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LOC127250073 hydroxyproline O-galactosyltransferase HPGT1-like [ Andrographis paniculata ]

Gene ID: 127250073, updated on 23-Nov-2023

Summary

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Gene symbol
LOC127250073
Gene description
hydroxyproline O-galactosyltransferase HPGT1-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Andrographis paniculata
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Acanthaceae; Acanthoideae; Andrographideae; Andrographis
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Genomic context

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See LOC127250073 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
13
Annotation release Status Assembly Chr Location
100 current ASM980555v1 (GCF_009805555.1) Unplaced Scaffold NW_026137570.1 (1242947..1247579, complement)

NW_026137570.1Genomic Context describing neighboring genes Neighboring gene mitochondrial adenine nucleotide transporter ADNT1-like Neighboring gene uncharacterized LOC127250072 Neighboring gene uncharacterized LOC127250074 Neighboring gene 6-phosphogluconate dehydrogenase, decarboxylating 3, chloroplastic-like Neighboring gene BTB/POZ domain-containing protein At2g46260-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_026137570 Unplaced Scaffold Reference ASM980555v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hexosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
hydroxyproline O-galactosyltransferase HPGT1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Andrographis paniculata Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM980555v1 Primary Assembly

Genomic

  1. NW_026137570.1 Reference ASM980555v1 Primary Assembly

    Range
    1242947..1247579 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_051273228.1 → XP_051129185.1  hydroxyproline O-galactosyltransferase HPGT1-like

RNA

  1. XR_007838528.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases