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LOC127249461 hydroxyproline O-galactosyltransferase GALT2-like [ Andrographis paniculata ]

Gene ID: 127249461, updated on 23-Nov-2023

Summary

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Gene symbol
LOC127249461
Gene description
hydroxyproline O-galactosyltransferase GALT2-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Andrographis paniculata
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Acanthaceae; Acanthoideae; Andrographideae; Andrographis
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Genomic context

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See LOC127249461 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
100 current ASM980555v1 (GCF_009805555.1) Unplaced Scaffold NW_026137569.1 (444013..448457, complement)

NW_026137569.1Genomic Context describing neighboring genes Neighboring gene tyrosine decarboxylase-like Neighboring gene CSC1-like protein ERD4 Neighboring gene WD repeat-containing protein LWD1-like Neighboring gene protein PLASTID TRANSCRIPTIONALLY ACTIVE 12, chloroplastic

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_026137569 Unplaced Scaffold Reference ASM980555v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables carbohydrate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables galactosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
hydroxyproline O-galactosyltransferase GALT2-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Andrographis paniculata Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM980555v1 Primary Assembly

Genomic

  1. NW_026137569.1 Reference ASM980555v1 Primary Assembly

    Range
    444013..448457 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_051272240.1 → XP_051128197.1  hydroxyproline O-galactosyltransferase GALT2-like isoform X1

  2. XM_051272241.1 → XP_051128198.1  hydroxyproline O-galactosyltransferase GALT2-like isoform X2

RNA

  1. XR_007838338.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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