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LOC127248657 probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 11 [ Andrographis paniculata ]

Gene ID: 127248657, updated on 23-Nov-2023

Summary

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Gene symbol
LOC127248657
Gene description
probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 11
Gene type
protein coding
RefSeq status
MODEL
Organism
Andrographis paniculata
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Acanthaceae; Acanthoideae; Andrographideae; Andrographis
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Genomic context

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See LOC127248657 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
100 current ASM980555v1 (GCF_009805555.1) Unplaced Scaffold NW_026137567.1 (2164826..2168216)

NW_026137567.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC127248565 Neighboring gene uncharacterized LOC127248567 Neighboring gene uncharacterized LOC127248752 Neighboring gene uncharacterized LOC127248658 Neighboring gene bifunctional purple acid phosphatase 26-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_026137567 Unplaced Scaffold Reference ASM980555v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables catalytic activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in trehalose biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in trehalose metabolism in response to stress IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 11

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Andrographis paniculata Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM980555v1 Primary Assembly

Genomic

  1. NW_026137567.1 Reference ASM980555v1 Primary Assembly

    Range
    2164826..2168216
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_051271113.1 → XP_051127070.1  probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 11

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases