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LOC127247873 xyloglucan 6-xylosyltransferase 2-like [ Andrographis paniculata ]

Gene ID: 127247873, updated on 23-Nov-2023

Summary

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Gene symbol
LOC127247873
Gene description
xyloglucan 6-xylosyltransferase 2-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Andrographis paniculata
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Acanthaceae; Acanthoideae; Andrographideae; Andrographis
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Genomic context

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See LOC127247873 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
2
Annotation release Status Assembly Chr Location
100 current ASM980555v1 (GCF_009805555.1) Unplaced Scaffold NW_026137391.1 (311676..313866, complement)

NW_026137391.1Genomic Context describing neighboring genes Neighboring gene translocase of chloroplast 159, chloroplastic Neighboring gene isoleucine--tRNA ligase, chloroplastic/mitochondrial Neighboring gene heat shock factor-binding protein-like Neighboring gene peroxidase 5-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_026137391 Unplaced Scaffold Reference ASM980555v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-xylosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables hexosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables xyloglucan 6-xylosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in xyloglucan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in trans-Golgi network IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
xyloglucan 6-xylosyltransferase 2-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Andrographis paniculata Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM980555v1 Primary Assembly

Genomic

  1. NW_026137391.1 Reference ASM980555v1 Primary Assembly

    Range
    311676..313866 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_051269939.1 → XP_051125896.1  xyloglucan 6-xylosyltransferase 2-like

Nucleotide Protein
Heading Accession and Version

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