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LOC127240941 callose synthase 10-like [ Andrographis paniculata ]

Gene ID: 127240941, updated on 23-Nov-2023

Summary

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Gene symbol
LOC127240941
Gene description
callose synthase 10-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Andrographis paniculata
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Acanthaceae; Acanthoideae; Andrographideae; Andrographis
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Genomic context

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See LOC127240941 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
50
Annotation release Status Assembly Chr Location
100 current ASM980555v1 (GCF_009805555.1) Unplaced Scaffold NW_026137618.1 (4064030..4094915)

NW_026137618.1Genomic Context describing neighboring genes Neighboring gene putative late blight resistance protein homolog R1B-16 Neighboring gene putative late blight resistance protein homolog R1C-3 Neighboring gene putative late blight resistance protein homolog R1A-10 Neighboring gene uncharacterized mitochondrial protein AtMg00810-like Neighboring gene SWR1 complex bromodomain subunit bdf1-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_026137618 Unplaced Scaffold Reference ASM980555v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 1,3-beta-D-glucan synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in (1->3)-beta-D-glucan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of 1,3-beta-D-glucan synthase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: callose synthase 10-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Andrographis paniculata Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM980555v1 Primary Assembly

Genomic

  1. NW_026137618.1 Reference ASM980555v1 Primary Assembly

    Range
    4064030..4094915
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_051259812.1 → XP_051115769.1  LOW QUALITY PROTEIN: callose synthase 10-like

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases