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B3galnt1 beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group) [ Phodopus roborovskii (desert hamster) ]

Gene ID: 127232681, updated on 24-Mar-2024

Summary

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Gene symbol
B3galnt1
Gene description
beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)
Locus tag
PHOROB_LOCUS12653
Gene type
protein coding
RefSeq status
MODEL
Organism
Phodopus roborovskii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Phodopus
Orthologs
human mouse all
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Genomic context

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See B3galnt1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2023_02 current PHOROB (GCF_943737965.1) Unplaced Scaffold NW_026126540.1 (4902838..4939427, complement)

NW_026126540.1Genomic Context describing neighboring genes Neighboring gene prothymosin alpha-like Neighboring gene protein phosphatase, Mg2+/Mn2+ dependent 1L Neighboring gene tubulin-specific chaperone A-like Neighboring gene ubiquitin-60S ribosomal protein L40-like Neighboring gene NMD3 ribosome export adaptor

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_026126540 Unplaced Scaffold Reference PHOROB Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-galactose:beta-N-acetylglucosamine beta-1,3-galactosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_943737965.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PHOROB Primary Assembly

Genomic

  1. NW_026126540.1 Reference PHOROB Primary Assembly

    Range
    4902838..4939427 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_051198865.1 → XP_051054822.1  UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 1

  2. XM_051198866.1 → XP_051054823.1  UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 1

  3. XM_051198867.1 → XP_051054824.1  UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 1

RNA

  1. XR_007835416.1 RNA Sequence

  2. XR_007835417.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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