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LOC1271971 prostaglandin reductase 1 [ Anopheles gambiae (African malaria mosquito) ]

Gene ID: 1271971, updated on 18-Sep-2024

Summary

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Gene symbol
LOC1271971
Gene description
prostaglandin reductase 1
See related
VectorBase:AGAMI1_005554
Gene type
protein coding
RefSeq status
MODEL
Organism
Anopheles gambiae
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Nematocera; Culicoidea; Culicidae; Anophelinae; Anopheles
Also known as
AGAP000288
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Genomic context

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See LOC1271971 in Genome Data Viewer
Location:
chromosome: X
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2023_12 current idAnoGambNW_F1_1 (GCF_943734735.2) X NC_064600.1 (5178088..5179516, complement)

Chromosome X - NC_064600.1Genomic Context describing neighboring genes Neighboring gene transmembrane protein 120 homolog Neighboring gene zinc finger protein 429 Neighboring gene prostaglandin reductase 1 Neighboring gene prostaglandin reductase 1 Neighboring gene phenoloxidase-activating factor 2 Neighboring gene mitochondrial import inner membrane translocase subunit TIM44

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_064600.1 Chromosome X Reference idAnoGambNW_F1_1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Pilot Anopheles gambiae full-length cDNA study: sequencing and initial characterization of 35,575 clones. Gomez SM, et al. Genome Biol, 2005. PMID 15833126, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 15-oxoprostaglandin 13-oxidase [NAD(P)+] activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables 2-alkenal reductase [NAD(P)+] activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in prostaglandin metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
prostaglandin reductase 1
Names
AGAP000288-PA

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_943734735.2-RS_2023_12

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference idAnoGambNW_F1_1 Primary Assembly

Genomic

  1. NC_064600.1 Reference idAnoGambNW_F1_1 Primary Assembly

    Range
    5178088..5179516 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_310833.6 → XP_310833.5  prostaglandin reductase 1

    See identical proteins and their annotated locations for XP_310833.5

    UniProtKB/TrEMBL
    Q7QF38
    Conserved Domains (2) summary
    cd08294
    Location:22 → 348
    leukotriene_B4_DH_like; 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity
    COG2130
    Location:23 → 348
    CurA; NADPH-dependent curcumin reductase CurA [Secondary metabolites biosynthesis, transport and catabolism, General function prediction only]
Nucleotide Protein Strain
Heading Accession and Version

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