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pak6b p21 protein (Cdc42/Rac)-activated kinase 6b [ Labeo rohita (rohu) ]

Gene ID: 127182619, updated on 10-Apr-2024

Summary

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Gene symbol
pak6b
Gene description
p21 protein (Cdc42/Rac)-activated kinase 6b
Locus tag
H4Q32_015245
See related
EnsemblRapid:ENSLROG00010004919
Gene type
protein coding
RefSeq status
MODEL
Organism
Labeo rohita
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Labeoninae; Labeonini; Labeo
Orthologs
zebrafish all
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Genomic context

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See pak6b in Genome Data Viewer
Location:
chromosome: 20
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2023_02 current IGBB_LRoh.1.0 (GCF_022985175.1) 20 NC_066888.1 (32609242..32656512)

Chromosome 20 - NC_066888.1Genomic Context describing neighboring genes Neighboring gene apolipoprotein Bb, tandem duplicate 2 Neighboring gene BUB1 mitotic checkpoint serine/threonine kinase Ba Neighboring gene solute carrier family 25 member 29 Neighboring gene myosin, heavy chain 6, cardiac muscle, alpha

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_066888.1 Chromosome 20 Reference IGBB_LRoh.1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein serine/threonine kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in intracellular signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of MAPK cascade IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
serine/threonine-protein kinase PAK 6b
Names
Serine/threonine-protein kinase PAK 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_022985175.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference IGBB_LRoh.1.0 Primary Assembly

Genomic

  1. NC_066888.1 Reference IGBB_LRoh.1.0 Primary Assembly

    Range
    32609242..32656512
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_051137999.1 → XP_050993956.1  serine/threonine-protein kinase PAK 6b

    Related
    ENSLROP00010006973.1, ENSLROT00010008422.1

  2. XM_051138000.1 → XP_050993957.1  serine/threonine-protein kinase PAK 6b

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases