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LOC127181485 collagen alpha-1(IX) chain [ Labeo rohita (rohu) ]

Gene ID: 127181485, updated on 24-Mar-2024

Summary

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Gene symbol
LOC127181485
Gene description
collagen alpha-1(IX) chain
Locus tag
H4Q32_006513
Gene type
protein coding
RefSeq status
MODEL
Organism
Labeo rohita
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Labeoninae; Labeonini; Labeo
Orthologs
zebrafish all
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Genomic context

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See LOC127181485 in Genome Data Viewer
Location:
chromosome: 19
Exon count:
38
Annotation release Status Assembly Chr Location
RS_2023_02 current IGBB_LRoh.1.0 (GCF_022985175.1) 19 NC_066887.1 (28893803..28936185, complement)

Chromosome 19 - NC_066887.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC127182302 Neighboring gene collagen, type XXII, alpha 1 Neighboring gene family with sequence similarity 135 member B Neighboring gene KH domain containing, RNA binding, signal transduction associated 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_066887.1 Chromosome 19 Reference IGBB_LRoh.1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
collagen alpha-1(IX) chain
Names
Replication protein 1a

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_022985175.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference IGBB_LRoh.1.0 Primary Assembly

Genomic

  1. NC_066887.1 Reference IGBB_LRoh.1.0 Primary Assembly

    Range
    28893803..28936185 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_051136252.1 → XP_050992209.1  collagen alpha-1(IX) chain

Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases