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ptk2aa protein tyrosine kinase 2aa [ Labeo rohita (rohu) ]

Gene ID: 127181451, updated on 10-Apr-2024

Summary

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Gene symbol
ptk2aa
Gene description
protein tyrosine kinase 2aa
Locus tag
H4Q32_006599
See related
EnsemblRapid:ENSLROG00010003460
Gene type
protein coding
RefSeq status
MODEL
Organism
Labeo rohita
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Labeoninae; Labeonini; Labeo
Orthologs
zebrafish all
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Genomic context

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See ptk2aa in Genome Data Viewer
Location:
chromosome: 19
Exon count:
34
Annotation release Status Assembly Chr Location
RS_2023_02 current IGBB_LRoh.1.0 (GCF_022985175.1) 19 NC_066887.1 (32677060..32769505)

Chromosome 19 - NC_066887.1Genomic Context describing neighboring genes Neighboring gene kelch-like family member 7 Neighboring gene DENN/MADD domain containing 3a Neighboring gene uncharacterized LOC127181453 Neighboring gene CLPTM1 like Neighboring gene ribosomal protein lateral stalk subunit P1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_066887.1 Chromosome 19 Reference IGBB_LRoh.1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein tyrosine kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in signal complex assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoskeleton IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in focal adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein tyrosine kinase 2aa
Names
Focal adhesion kinase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_022985175.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference IGBB_LRoh.1.0 Primary Assembly

Genomic

  1. NC_066887.1 Reference IGBB_LRoh.1.0 Primary Assembly

    Range
    32677060..32769505
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_051136212.1 → XP_050992169.1  protein tyrosine kinase 2aa isoform X5

  2. XM_051136208.1 → XP_050992165.1  protein tyrosine kinase 2aa isoform X1

  3. XM_051136210.1 → XP_050992167.1  protein tyrosine kinase 2aa isoform X3

  4. XM_051136209.1 → XP_050992166.1  protein tyrosine kinase 2aa isoform X2

    Related
    ENSLROP00010005154.1, ENSLROT00010006393.1

  5. XM_051136211.1 → XP_050992168.1  protein tyrosine kinase 2aa isoform X4

    Related
    ENSLROP00010005370.1, ENSLROT00010006637.1
Nucleotide Protein
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