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pak1 p21 protein (Cdc42/Rac)-activated kinase 1 [ Labeo rohita (rohu) ]

Gene ID: 127180889, updated on 6-Jun-2024

Summary

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Gene symbol
pak1
Gene description
p21 protein (Cdc42/Rac)-activated kinase 1
Locus tag
H4Q32_013569
See related
EnsemblRapid:ENSLROG00010011760
Gene type
protein coding
RefSeq status
MODEL
Organism
Labeo rohita
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Labeoninae; Labeonini; Labeo
Orthologs
human zebrafish all
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Genomic context

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See pak1 in Genome Data Viewer
Location:
chromosome: 18
Exon count:
17
Annotation release Status Assembly Chr Location
RS_2023_02 current IGBB_LRoh.1.0 (GCF_022985175.1) 18 NC_066886.1 (2543489..2612881, complement)

Chromosome 18 - NC_066886.1Genomic Context describing neighboring genes Neighboring gene myosin VIIAa Neighboring gene glycerophosphodiester phosphodiesterase domain containing 4a Neighboring gene aquaporin 11 Neighboring gene chloride channel, nucleotide-sensitive, 1A

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_066886.1 Chromosome 18 Reference IGBB_LRoh.1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein serine/threonine kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in intracellular signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of MAPK cascade IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of actin cytoskeleton organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of axonogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
serine/threonine-protein kinase PAK 1
Names
Serine/threonine-protein kinase PAK 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_022985175.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference IGBB_LRoh.1.0 Primary Assembly

Genomic

  1. NC_066886.1 Reference IGBB_LRoh.1.0 Primary Assembly

    Range
    2543489..2612881 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_051135255.1 → XP_050991212.1  serine/threonine-protein kinase PAK 1

    UniProtKB/TrEMBL
    A0A498NT33
    Related
    ENSLROP00010022646.1, ENSLROT00010024772.1

  2. XM_051135256.1 → XP_050991213.1  serine/threonine-protein kinase PAK 1

    UniProtKB/TrEMBL
    A0A498NT33
    Related
    ENSLROP00010022565.1, ENSLROT00010024691.1

  3. XM_051135257.1 → XP_050991214.1  serine/threonine-protein kinase PAK 1

    UniProtKB/TrEMBL
    A0A498NT33

  4. XM_051135258.1 → XP_050991215.1  serine/threonine-protein kinase PAK 1

    UniProtKB/TrEMBL
    A0A498NT33
    Related
    ENSLROP00010022304.1, ENSLROT00010024430.1
Nucleotide Protein
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