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pip5k1ab phosphatidylinositol-4-phosphate 5-kinase, type I, alpha, b [ Labeo rohita (rohu) ]

Gene ID: 127178390, updated on 10-Apr-2024

Summary

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Gene symbol
pip5k1ab
Gene description
phosphatidylinositol-4-phosphate 5-kinase, type I, alpha, b
Locus tag
H4Q32_017932
See related
EnsemblRapid:ENSLROG00010008366
Gene type
protein coding
RefSeq status
MODEL
Organism
Labeo rohita
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Labeoninae; Labeonini; Labeo
Orthologs
zebrafish all
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Genomic context

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See pip5k1ab in Genome Data Viewer
Location:
chromosome: 16
Exon count:
17
Annotation release Status Assembly Chr Location
RS_2023_02 current IGBB_LRoh.1.0 (GCF_022985175.1) 16 NC_066884.1 (27791405..27814016)

Chromosome 16 - NC_066884.1Genomic Context describing neighboring genes Neighboring gene RAR-related orphan receptor C Neighboring gene uncharacterized LOC127178492 Neighboring gene extracellular matrix protein 1b Neighboring gene proteasome 26S subunit ubiquitin receptor, non-ATPase 4b Neighboring gene vesicle associated membrane protein 1b

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_066884.1 Chromosome 16 Reference IGBB_LRoh.1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatidylinositol kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in phosphatidylinositol metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
phosphatidylinositol 4-phosphate 5-kinase type-1 alpha
Names
Phosphatidylinositol 4-phosphate 5-kinase type-1 alpha

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_022985175.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference IGBB_LRoh.1.0 Primary Assembly

Genomic

  1. NC_066884.1 Reference IGBB_LRoh.1.0 Primary Assembly

    Range
    27791405..27814016
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_051131243.1 → XP_050987200.1  phosphatidylinositol 4-phosphate 5-kinase type-1 alpha isoform X1

    Related
    ENSLROP00010014811.1, ENSLROT00010016548.1

  2. XM_051131244.1 → XP_050987201.1  phosphatidylinositol 4-phosphate 5-kinase type-1 alpha isoform X2

    Related
    ENSLROP00010014820.1, ENSLROT00010016556.1
Nucleotide Protein
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