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si:ch211-241e1.3 laminin subunit alpha-3 [ Labeo rohita (rohu) ]

Gene ID: 127176443, updated on 6-Jun-2024

Summary

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Gene symbol
si:ch211-241e1.3
Gene description
laminin subunit alpha-3
Locus tag
H4Q32_003571
See related
EnsemblRapid:ENSLROG00010014994
Gene type
protein coding
RefSeq status
MODEL
Organism
Labeo rohita
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Labeoninae; Labeonini; Labeo
Orthologs
zebrafish all
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Genomic context

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See si:ch211-241e1.3 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
31
Annotation release Status Assembly Chr Location
RS_2023_02 current IGBB_LRoh.1.0 (GCF_022985175.1) 2 NC_066870.1 (2189534..2207234, complement)

Chromosome 2 - NC_066870.1Genomic Context describing neighboring genes Neighboring gene calcium channel, voltage-dependent, R type, alpha 1E subunit b Neighboring gene gastrula zinc finger protein XlCGF8.2DB Neighboring gene WRN helicase interacting protein 1 Neighboring gene 5S ribosomal RNA Neighboring gene 5S ribosomal RNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_066870.1 Chromosome 2 Reference IGBB_LRoh.1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables extracellular matrix structural constituent IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables signaling receptor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in axon guidance IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of cell migration IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of embryonic development IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in basement membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
laminin subunit alpha-3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_022985175.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference IGBB_LRoh.1.0 Primary Assembly

Genomic

  1. NC_066870.1 Reference IGBB_LRoh.1.0 Primary Assembly

    Range
    2189534..2207234 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_051128125.1 → XP_050984082.1  laminin subunit alpha-3

    UniProtKB/TrEMBL
    A0A498NBH7
    Related
    ENSLROP00010029419.1, ENSLROT00010031849.1
Nucleotide Protein
Heading Accession and Version

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