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st6galnac1.1 ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1, tandem duplicate 1 [ Labeo rohita (rohu) ]

Gene ID: 127174541, updated on 10-Apr-2024

Summary

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Gene symbol
st6galnac1.1
Gene description
ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1, tandem duplicate 1
See related
EnsemblRapid:ENSLROG00010023073
Gene type
protein coding
RefSeq status
MODEL
Organism
Labeo rohita
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Labeoninae; Labeonini; Labeo
Orthologs
zebrafish all
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Genomic context

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See st6galnac1.1 in Genome Data Viewer
Location:
chromosome: 12
Exon count:
10
Annotation release Status Assembly Chr Location
RS_2023_02 current IGBB_LRoh.1.0 (GCF_022985175.1) 12 NC_066880.1 (17505563..17513771, complement)

Chromosome 12 - NC_066880.1Genomic Context describing neighboring genes Neighboring gene NME/NM23 nucleoside diphosphate kinase 2a Neighboring gene CASK interacting protein 2 Neighboring gene ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1, tandem duplicate 2 Neighboring gene matrix-remodeling-associated protein 7-like Neighboring gene gastric inhibitory polypeptide

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_066880.1 Chromosome 12 Reference IGBB_LRoh.1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables sialyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1.1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_022985175.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference IGBB_LRoh.1.0 Primary Assembly

Genomic

  1. NC_066880.1 Reference IGBB_LRoh.1.0 Primary Assembly

    Range
    17505563..17513771 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_051125038.1 → XP_050980995.1  alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1.1

    Related
    ENSLROP00010046259.1, ENSLROT00010050437.1

RNA

  1. XR_007828888.1 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version

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Molecular Biology Databases