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cav4a caveolin 4a [ Labeo rohita (rohu) ]

Gene ID: 127173361, updated on 10-Apr-2024

Summary

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Gene symbol
cav4a
Gene description
caveolin 4a
Locus tag
H4Q32_023248
See related
EnsemblRapid:ENSLROG00010027494
Gene type
protein coding
RefSeq status
MODEL
Organism
Labeo rohita
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Labeoninae; Labeonini; Labeo
Also known as
Caveolin-2
Orthologs
zebrafish all
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Genomic context

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See cav4a in Genome Data Viewer
Location:
chromosome: 11
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2023_02 current IGBB_LRoh.1.0 (GCF_022985175.1) 11 NC_066879.1 (18190564..18196117, complement)

Chromosome 11 - NC_066879.1Genomic Context describing neighboring genes Neighboring gene sortilin 1a Neighboring gene nuclear transcription factor Y, alpha Neighboring gene probable G-protein coupled receptor Neighboring gene ribosomal RNA processing 9, U3 small nucleolar RNA binding protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_066879.1 Chromosome 11 Reference IGBB_LRoh.1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables molecular adaptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in caveola assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in caveola IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
caveolin-2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_022985175.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference IGBB_LRoh.1.0 Primary Assembly

Genomic

  1. NC_066879.1 Reference IGBB_LRoh.1.0 Primary Assembly

    Range
    18190564..18196117 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_051123194.1 → XP_050979151.1  caveolin-2

    Related
    ENSLROP00010054333.1, ENSLROT00010060114.1
Nucleotide Protein
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