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col6a2 collagen, type VI, alpha 2 [ Labeo rohita (rohu) ]

Gene ID: 127172976, updated on 10-Apr-2024

Summary

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Gene symbol
col6a2
Gene description
collagen, type VI, alpha 2
See related
EnsemblRapid:ENSLROG00010016836
Gene type
protein coding
RefSeq status
MODEL
Organism
Labeo rohita
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Labeoninae; Labeonini; Labeo
Orthologs
human zebrafish all
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Genomic context

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See col6a2 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
29
Annotation release Status Assembly Chr Location
RS_2023_02 current IGBB_LRoh.1.0 (GCF_022985175.1) 11 NC_066879.1 (19586741..19606562)

Chromosome 11 - NC_066879.1Genomic Context describing neighboring genes Neighboring gene tryptophan 2,3-dioxygenase b Neighboring gene collagen, type VI, alpha 1 Neighboring gene phosphorylase kinase, alpha 2 (liver) Neighboring gene uncharacterized si:ch211-227n13.3

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_066879.1 Chromosome 11 Reference IGBB_LRoh.1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
collagen alpha-2(VI) chain

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_022985175.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference IGBB_LRoh.1.0 Primary Assembly

Genomic

  1. NC_066879.1 Reference IGBB_LRoh.1.0 Primary Assembly

    Range
    19586741..19606562
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_051122552.1 → XP_050978509.1  collagen alpha-2(VI) chain isoform X3

  2. XM_051122551.1 → XP_050978508.1  collagen alpha-2(VI) chain isoform X2

    Related
    ENSLROP00010033709.1, ENSLROT00010036345.1

  3. XM_051122550.1 → XP_050978507.1  collagen alpha-2(VI) chain isoform X1

    Related
    ENSLROP00010033756.1, ENSLROT00010036391.1
Nucleotide Protein Strain
Heading Accession and Version

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