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tjp2a tight junction protein 2a (zona occludens 2) [ Labeo rohita (rohu) ]

Gene ID: 127171900, updated on 10-Apr-2024

Summary

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Gene symbol
tjp2a
Gene description
tight junction protein 2a (zona occludens 2)
Locus tag
H4Q32_022656
See related
EnsemblRapid:ENSLROG00010007014
Gene type
protein coding
RefSeq status
MODEL
Organism
Labeo rohita
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Labeoninae; Labeonini; Labeo
Orthologs
zebrafish all
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Genomic context

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See tjp2a in Genome Data Viewer
Location:
chromosome: 10
Exon count:
26
Annotation release Status Assembly Chr Location
RS_2023_02 current IGBB_LRoh.1.0 (GCF_022985175.1) 10 NC_066878.1 (20226593..20269760)

Chromosome 10 - NC_066878.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC127171525 Neighboring gene phosphatidylinositol-4-phosphate 5-kinase, type I, beta a Neighboring gene amyloid beta (A4) precursor protein-binding, family A, member 1b Neighboring gene MAM domain containing 2b

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_066878.1 Chromosome 10 Reference IGBB_LRoh.1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cell adhesion molecule binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell-cell junction organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in establishment of endothelial intestinal barrier IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of blood-brain barrier permeability IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein localization to cell-cell junction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in bicellular tight junction IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tight junction protein ZO-2a
Names
Tight junction protein ZO-2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_022985175.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference IGBB_LRoh.1.0 Primary Assembly

Genomic

  1. NC_066878.1 Reference IGBB_LRoh.1.0 Primary Assembly

    Range
    20226593..20269760
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_051120835.1 → XP_050976792.1  tight junction protein ZO-2a isoform X3

    Related
    ENSLROP00010011714.1, ENSLROT00010013334.1

  2. XM_051120834.1 → XP_050976791.1  tight junction protein ZO-2a isoform X2

    Related
    ENSLROP00010011652.1, ENSLROT00010013272.1

  3. XM_051120833.1 → XP_050976790.1  tight junction protein ZO-2a isoform X1

    Related
    ENSLROP00010011645.1, ENSLROT00010013265.1
Nucleotide Protein
Heading Accession and Version

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