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itga6b integrin, alpha 6b [ Labeo rohita (rohu) ]

Gene ID: 127168635, updated on 6-Jun-2024

Summary

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Gene symbol
itga6b
Gene description
integrin, alpha 6b
Locus tag
H4Q32_005157
See related
EnsemblRapid:ENSLROG00010016798
Gene type
protein coding
RefSeq status
MODEL
Organism
Labeo rohita
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Labeoninae; Labeonini; Labeo
Orthologs
zebrafish all
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Genomic context

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See itga6b in Genome Data Viewer
Location:
chromosome: 1
Exon count:
26
Annotation release Status Assembly Chr Location
RS_2023_02 current IGBB_LRoh.1.0 (GCF_022985175.1) 1 NC_066869.1 (29160148..29185345, complement)

Chromosome 1 - NC_066869.1Genomic Context describing neighboring genes Neighboring gene eukaryotic translation elongation factor 1 alpha 1b Neighboring gene protein phosphatase 1 regulatory subunit 9A-like B Neighboring gene distal-less homeobox 2b Neighboring gene methionyl aminopeptidase type 1D (mitochondrial)

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_066869.1 Chromosome 1 Reference IGBB_LRoh.1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables integrin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell adhesion mediated by integrin IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell-matrix adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in integrin-mediated signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in leukocyte migration IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in external side of plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of integrin complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
integrin alpha-6b
Names
Integrin alpha-6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_022985175.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference IGBB_LRoh.1.0 Primary Assembly

Genomic

  1. NC_066869.1 Reference IGBB_LRoh.1.0 Primary Assembly

    Range
    29160148..29185345 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_051115686.1 → XP_050971643.1  integrin alpha-6b

    UniProtKB/TrEMBL
    A0A498LBX9
    Related
    ENSLROP00010033676.1, ENSLROT00010036311.1
Nucleotide Protein
Heading Accession and Version

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