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myl12.1 myosin, light chain 12, genome duplicate 1 [ Labeo rohita (rohu) ]

Gene ID: 127168615, updated on 10-Oct-2024

Summary

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Gene symbol
myl12.1
Gene description
myosin, light chain 12, genome duplicate 1
Locus tag
H4Q32_000904
See related
EnsemblRapid:ENSLROG00010019394
Gene type
protein coding
RefSeq status
MODEL
Organism
Labeo rohita
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Labeoninae; Labeonini; Labeo
Orthologs
zebrafish all
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Genomic context

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See myl12.1 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2023_02 current IGBB_LRoh.1.0 (GCF_022985175.1) 7 NC_066875.1 (3624601..3628591, complement)

Chromosome 7 - NC_066875.1Genomic Context describing neighboring genes Neighboring gene calcium channel, voltage-dependent, beta 2a Neighboring gene calphotin-like Neighboring gene NOP2/Sun RNA methyltransferase 6 Neighboring gene myomesin 1b Neighboring gene elastin microfibril interfacer 2b

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_066875.1 Chromosome 7 Reference IGBB_LRoh.1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
myosin, light chain 12, genome duplicate 1
Names
Myosin regulatory light chain 2, smooth muscle minor isoform

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_022985175.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference IGBB_LRoh.1.0 Primary Assembly

Genomic

  1. NC_066875.1 Reference IGBB_LRoh.1.0 Primary Assembly

    Range
    3624601..3628591 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_051115629.1 → XP_050971586.1  myosin, light chain 12, genome duplicate 1

    UniProtKB/TrEMBL
    A0A498MVY7
    Related
    ENSLROP00010038843.1, ENSLROT00010041993.1
Nucleotide Protein
Heading Accession and Version

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