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kirrel1a kirre like nephrin family adhesion molecule 1a [ Labeo rohita (rohu) ]

Gene ID: 127168238, updated on 10-Apr-2024

Summary

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Gene symbol
kirrel1a
Gene description
kirre like nephrin family adhesion molecule 1a
Locus tag
H4Q32_001841
See related
EnsemblRapid:ENSLROG00010029040
Gene type
protein coding
RefSeq status
MODEL
Organism
Labeo rohita
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Labeoninae; Labeonini; Labeo
Orthologs
zebrafish all
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Genomic context

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See kirrel1a in Genome Data Viewer
Location:
chromosome: 7
Exon count:
15
Annotation release Status Assembly Chr Location
RS_2023_02 current IGBB_LRoh.1.0 (GCF_022985175.1) 7 NC_066875.1 (39670135..39716486)

Chromosome 7 - NC_066875.1Genomic Context describing neighboring genes Neighboring gene interleukin 13 receptor, alpha 1 Neighboring gene transfer RNA arginine (anticodon UCU) Neighboring gene NADH:ubiquinone oxidoreductase core subunit S2 Neighboring gene Fc epsilon receptor IgFc epsilon receptor Ig

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_066875.1 Chromosome 7 Reference IGBB_LRoh.1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cell adhesion molecule binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell-cell junction IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
kin of IRRE-like protein 1a
Names
Kin of IRRE-like protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_022985175.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference IGBB_LRoh.1.0 Primary Assembly

Genomic

  1. NC_066875.1 Reference IGBB_LRoh.1.0 Primary Assembly

    Range
    39670135..39716486
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_051114886.1 → XP_050970843.1  kin of IRRE-like protein 1a isoform X1

    Related
    ENSLROP00010056720.1, ENSLROT00010063243.1

  2. XM_051114889.1 → XP_050970846.1  kin of IRRE-like protein 1a isoform X3

  3. XM_051114888.1 → XP_050970845.1  kin of IRRE-like protein 1a isoform X2

    Related
    ENSLROP00010056719.1, ENSLROT00010063242.1
Nucleotide Protein
Heading Accession and Version

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