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capza1a capping actin protein of muscle Z-line subunit alpha 1a [ Labeo rohita (rohu) ]

Gene ID: 127167117, updated on 10-Apr-2024

Summary

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Gene symbol
capza1a
Gene description
capping actin protein of muscle Z-line subunit alpha 1a
Locus tag
H4Q32_012439
See related
EnsemblRapid:ENSLROG00010020578
Gene type
protein coding
RefSeq status
MODEL
Organism
Labeo rohita
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Labeoninae; Labeonini; Labeo
Orthologs
zebrafish all
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Genomic context

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See capza1a in Genome Data Viewer
Location:
chromosome: 6
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2023_02 current IGBB_LRoh.1.0 (GCF_022985175.1) 6 NC_066874.1 (29631527..29640246, complement)

Chromosome 6 - NC_066874.1Genomic Context describing neighboring genes Neighboring gene wingless-type MMTV integration site family, member 2Ba Neighboring gene suppression of tumorigenicity 7 like Neighboring gene Mov10 RNA helicase a Neighboring gene ras homolog family member Ca

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_066874.1 Chromosome 6 Reference IGBB_LRoh.1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables actin filament binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in actin cytoskeleton organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in barbed-end actin filament capping IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of F-actin capping protein complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in actin cortical patch IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
F-actin-capping protein subunit alpha-1a
Names
F-actin-capping protein subunit alpha-1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_022985175.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference IGBB_LRoh.1.0 Primary Assembly

Genomic

  1. NC_066874.1 Reference IGBB_LRoh.1.0 Primary Assembly

    Range
    29631527..29640246 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_051112952.1 → XP_050968909.1  F-actin-capping protein subunit alpha-1a

    UniProtKB/TrEMBL
    A0A498MZB2
    Related
    ENSLROP00010041516.1, ENSLROT00010045035.1
Nucleotide Protein
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