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ppm1j protein phosphatase, Mg2+/Mn2+ dependent, 1J [ Labeo rohita (rohu) ]

Gene ID: 127167041, updated on 10-Apr-2024

Summary

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Gene symbol
ppm1j
Gene description
protein phosphatase, Mg2+/Mn2+ dependent, 1J
See related
EnsemblRapid:ENSLROG00010021342
Gene type
protein coding
RefSeq status
MODEL
Organism
Labeo rohita
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Labeoninae; Labeonini; Labeo
Orthologs
zebrafish all
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Genomic context

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See ppm1j in Genome Data Viewer
Location:
chromosome: 6
Exon count:
10
Annotation release Status Assembly Chr Location
RS_2023_02 current IGBB_LRoh.1.0 (GCF_022985175.1) 6 NC_066874.1 (29675522..29697333, complement)

Chromosome 6 - NC_066874.1Genomic Context describing neighboring genes Neighboring gene Mov10 RNA helicase a Neighboring gene ras homolog family member Ca Neighboring gene TAFA chemokine like family member 3a Neighboring gene synaptonemal complex protein 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_066874.1 Chromosome 6 Reference IGBB_LRoh.1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein serine/threonine phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein phosphatase 1H

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_022985175.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference IGBB_LRoh.1.0 Primary Assembly

Genomic

  1. NC_066874.1 Reference IGBB_LRoh.1.0 Primary Assembly

    Range
    29675522..29697333 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_051112849.1 → XP_050968806.1  protein phosphatase 1H

    Related
    ENSLROP00010042862.1, ENSLROT00010046570.1
Nucleotide Protein Strain
Heading Accession and Version

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