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myl2a myosin, light chain 2a, regulatory, cardiac, slow [ Labeo rohita (rohu) ]

Gene ID: 127165543, updated on 10-Apr-2024

Summary

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Gene symbol
myl2a
Gene description
myosin, light chain 2a, regulatory, cardiac, slow
Locus tag
H4Q32_003442
See related
EnsemblRapid:ENSLROG00010002650
Gene type
protein coding
RefSeq status
MODEL
Organism
Labeo rohita
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Labeoninae; Labeonini; Labeo
Orthologs
zebrafish all
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Genomic context

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See myl2a in Genome Data Viewer
Location:
chromosome: 5
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2023_02 current IGBB_LRoh.1.0 (GCF_022985175.1) 5 NC_066873.1 (45552706..45559317, complement)

Chromosome 5 - NC_066873.1Genomic Context describing neighboring genes Neighboring gene MCC regulator of WNT signaling pathway Neighboring gene protein phosphatase 1, catalytic subunit, gamma isozyme Neighboring gene myotubularin-related protein 3 Neighboring gene cut-like homeobox 2a

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_066873.1 Chromosome 5 Reference IGBB_LRoh.1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cardiac muscle contraction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in heart development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in muscle cell fate specification IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in myofibril IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
myosin regulatory light chain 2a
Names
Myosin regulatory light chain 2, ventricular/cardiac muscle isoform

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_022985175.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference IGBB_LRoh.1.0 Primary Assembly

Genomic

  1. NC_066873.1 Reference IGBB_LRoh.1.0 Primary Assembly

    Range
    45552706..45559317 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_051110270.1 → XP_050966227.1  myosin regulatory light chain 2a

    Related
    ENSLROP00010003668.1, ENSLROT00010004570.1
Nucleotide Protein
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