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suclg1 succinate-CoA ligase GDP/ADP-forming subunit alph [ Labeo rohita (rohu) ]

Gene ID: 127163848, updated on 10-Apr-2024

Summary

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Gene symbol
suclg1
Gene description
succinate-CoA ligase GDP/ADP-forming subunit alph
See related
EnsemblRapid:ENSLROG00010019949
Gene type
protein coding
RefSeq status
MODEL
Organism
Labeo rohita
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Labeoninae; Labeonini; Labeo
Orthologs
human zebrafish all
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Genomic context

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See suclg1 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2023_02 current IGBB_LRoh.1.0 (GCF_022985175.1) 1 NC_066869.1 (22034973..22056456, complement)

Chromosome 1 - NC_066869.1Genomic Context describing neighboring genes Neighboring gene catenin (cadherin-associated protein), alpha 2 Neighboring gene uncharacterized LOC127163918 Neighboring gene leucine rich repeat transmembrane neuronal 1 Neighboring gene sodium/hydrogen exchanger 9B2 Neighboring gene CDGSH iron sulfur domain 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_066869.1 Chromosome 1 Reference IGBB_LRoh.1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables succinate-CoA ligase (ADP-forming) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables succinate-CoA ligase (GDP-forming) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in tricarboxylic acid cycle IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of succinate-CoA ligase complex (ADP-forming) IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
succinate--CoA ligase [ADP/GDP-forming] subunit alpha, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_022985175.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference IGBB_LRoh.1.0 Primary Assembly

Genomic

  1. NC_066869.1 Reference IGBB_LRoh.1.0 Primary Assembly

    Range
    22034973..22056456 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_051107354.1 → XP_050963311.1  succinate--CoA ligase [ADP/GDP-forming] subunit alpha, mitochondrial

    Related
    ENSLROP00010039901.1, ENSLROT00010043273.1
Nucleotide Protein Strain
Heading Accession and Version

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