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itgb3a integrin beta 3a [ Labeo rohita (rohu) ]

Gene ID: 127163361, updated on 6-Jun-2024

Summary

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Gene symbol
itgb3a
Gene description
integrin beta 3a
Locus tag
H4Q32_010282
See related
EnsemblRapid:ENSLROG00010011517
Gene type
protein coding
RefSeq status
MODEL
Organism
Labeo rohita
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Labeoninae; Labeonini; Labeo
Orthologs
zebrafish all
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Genomic context

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See itgb3a in Genome Data Viewer
Location:
chromosome: 3
Exon count:
15
Annotation release Status Assembly Chr Location
RS_2023_02 current IGBB_LRoh.1.0 (GCF_022985175.1) 3 NC_066871.1 (25528954..25545001)

Chromosome 3 - NC_066871.1Genomic Context describing neighboring genes Neighboring gene chymotrypsinogen A-like Neighboring gene reprimo-like Neighboring gene methyltransferase 2A, methylcytidine Neighboring gene tousled-like kinase 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_066871.1 Chromosome 3 Reference IGBB_LRoh.1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables fibrinogen binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables fibronectin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables integrin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell adhesion mediated by integrin IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell migration IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell-matrix adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in integrin-mediated signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell surface IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in focal adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of integrin complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
integrin beta-3a
Names
Integrin beta-3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_022985175.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference IGBB_LRoh.1.0 Primary Assembly

Genomic

  1. NC_066871.1 Reference IGBB_LRoh.1.0 Primary Assembly

    Range
    25528954..25545001
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_051106559.1 → XP_050962516.1  integrin beta-3a

    UniProtKB/TrEMBL
    A0A498M0F6
    Related
    ENSLROP00010022101.1, ENSLROT00010024227.1
Nucleotide Protein
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