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itga3a integrin, alpha 3a [ Labeo rohita (rohu) ]

Gene ID: 127163042, updated on 10-Apr-2024

Summary

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Gene symbol
itga3a
Gene description
integrin, alpha 3a
Locus tag
H4Q32_009999
See related
EnsemblRapid:ENSLROG00010023207
Gene type
protein coding
RefSeq status
MODEL
Organism
Labeo rohita
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Labeoninae; Labeonini; Labeo
Orthologs
zebrafish all
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Genomic context

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See itga3a in Genome Data Viewer
Location:
chromosome: 3
Exon count:
26
Annotation release Status Assembly Chr Location
RS_2023_02 current IGBB_LRoh.1.0 (GCF_022985175.1) 3 NC_066871.1 (14996142..15041573, complement)

Chromosome 3 - NC_066871.1Genomic Context describing neighboring genes Neighboring gene SWI/SNF related BAF chromatin remodeling complex subunit E1 Neighboring gene carbonic anhydrase Xb Neighboring gene cyclin-dependent kinase 5, regulatory subunit 1a (p35) Neighboring gene proteasome 26S subunit, non-ATPase 11a

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_066871.1 Chromosome 3 Reference IGBB_LRoh.1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables integrin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell adhesion mediated by integrin IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell-matrix adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in integrin-mediated signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in leukocyte migration IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in external side of plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of integrin complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
integrin alpha-3
Names
Integrin alpha-3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_022985175.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference IGBB_LRoh.1.0 Primary Assembly

Genomic

  1. NC_066871.1 Reference IGBB_LRoh.1.0 Primary Assembly

    Range
    14996142..15041573 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_051106050.1 → XP_050962007.1  integrin alpha-3

    Related
    ENSLROP00010046481.1, ENSLROT00010050729.1
Nucleotide Protein
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Gene LinkOut

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