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LOC127159480 calpain-2 catalytic subunit-like [ Labeo rohita (rohu) ]

Gene ID: 127159480, updated on 10-Apr-2024

Summary

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Gene symbol
LOC127159480
Gene description
calpain-2 catalytic subunit-like
See related
EnsemblRapid:ENSLROG00010003599
Gene type
protein coding
RefSeq status
MODEL
Organism
Labeo rohita
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Labeoninae; Labeonini; Labeo
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Genomic context

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See LOC127159480 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
21
Annotation release Status Assembly Chr Location
RS_2023_02 current IGBB_LRoh.1.0 (GCF_022985175.1) Unplaced Scaffold NW_026128440.1 (75317..87121, complement)

NW_026128440.1Genomic Context describing neighboring genes Neighboring gene calpain 2, (m/II) large subunit, like Neighboring gene calpain-2 catalytic subunit-like Neighboring gene calpain-2 catalytic subunit-like Neighboring gene uncharacterized LOC127159479

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_026128440 Unplaced Scaffold Reference IGBB_LRoh.1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calcium-dependent cysteine-type endopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in proteolysis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
calpain-2 catalytic subunit-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_022985175.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference IGBB_LRoh.1.0 Primary Assembly

Genomic

  1. NW_026128440.1 Reference IGBB_LRoh.1.0 Primary Assembly

    Range
    75317..87121 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_051102288.1 → XP_050958245.1  calpain-2 catalytic subunit-like

    Related
    ENSLROT00010006102.1
Nucleotide Protein Strain
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