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src v-src avian sarcoma (Schmidt-Ruppin A-2) viral oncogene homolog [ Labeo rohita (rohu) ]

Gene ID: 127154786, updated on 10-Apr-2024

Summary

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Gene symbol
src
Gene description
v-src avian sarcoma (Schmidt-Ruppin A-2) viral oncogene homolog
Locus tag
H4Q32_015432
See related
EnsemblRapid:ENSLROG00010017425
Gene type
protein coding
RefSeq status
MODEL
Organism
Labeo rohita
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Labeoninae; Labeonini; Labeo
Orthologs
zebrafish all
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Genomic context

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See src in Genome Data Viewer
Location:
chromosome: 23
Exon count:
14
Annotation release Status Assembly Chr Location
RS_2023_02 current IGBB_LRoh.1.0 (GCF_022985175.1) 23 NC_066891.1 (5314758..5381720)

Chromosome 23 - NC_066891.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC127155101 Neighboring gene potassium voltage-gated channel, subfamily G, member 1 Neighboring gene microtubule associated monooxygenase, calponin and LIM domain containing 1 Neighboring gene calcium/calmodulin-dependent protein kinase IGb

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_066891.1 Chromosome 23 Reference IGBB_LRoh.1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables growth factor receptor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables non-membrane spanning protein tyrosine kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in bone resorption IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in epidermal growth factor receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in innate immune response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of extrinsic apoptotic signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of intrinsic apoptotic signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in osteoclast development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in progesterone receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extrinsic component of cytoplasmic side of plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
proto-oncogene tyrosine-protein kinase Src
Names
Proto-oncogene tyrosine-protein kinase Src

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_022985175.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference IGBB_LRoh.1.0 Primary Assembly

Genomic

  1. NC_066891.1 Reference IGBB_LRoh.1.0 Primary Assembly

    Range
    5314758..5381720
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_051096596.1 → XP_050952553.1  proto-oncogene tyrosine-protein kinase Src isoform X1

    Related
    ENSLROP00010034716.1, ENSLROT00010037485.1

  2. XM_051096598.1 → XP_050952555.1  proto-oncogene tyrosine-protein kinase Src isoform X2

    Related
    ENSLROP00010034729.1, ENSLROT00010037496.1

  3. XM_051096597.1 → XP_050952554.1  proto-oncogene tyrosine-protein kinase Src isoform X1

Nucleotide Protein
Heading Accession and Version

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