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rapgef1b Rap guanine nucleotide exchange factor (GEF) 1b [ Labeo rohita (rohu) ]

Gene ID: 127152696, updated on 24-Mar-2024

Summary

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Gene symbol
rapgef1b
Gene description
Rap guanine nucleotide exchange factor (GEF) 1b
Locus tag
H4Q32_019756
Gene type
protein coding
RefSeq status
MODEL
Organism
Labeo rohita
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Labeoninae; Labeonini; Labeo
Orthologs
human zebrafish all
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Genomic context

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See rapgef1b in Genome Data Viewer
Location:
chromosome: 21
Exon count:
27
Annotation release Status Assembly Chr Location
RS_2023_02 current IGBB_LRoh.1.0 (GCF_022985175.1) 21 NC_066889.1 (28059035..28100034, complement)

Chromosome 21 - NC_066889.1Genomic Context describing neighboring genes Neighboring gene DNL-type zinc finger Neighboring gene uridine-cytidine kinase 1 Neighboring gene uncharacterized LOC127152621 Neighboring gene netrin g2b Neighboring gene uncharacterized LOC127152623

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_066889.1 Chromosome 21 Reference IGBB_LRoh.1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables guanyl-nucleotide exchange factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in Ras protein signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: rap guanine nucleotide exchange factor 1b
Names
Rap guanine nucleotide exchange factor 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_022985175.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference IGBB_LRoh.1.0 Primary Assembly

Genomic

  1. NC_066889.1 Reference IGBB_LRoh.1.0 Primary Assembly

    Range
    28059035..28100034 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_051093512.1 → XP_050949469.1  LOW QUALITY PROTEIN: rap guanine nucleotide exchange factor 1b

Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases