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LOC127138364 probable beta-1,3-galactosyltransferase 2 [ Pisum sativum (garden pea) ]

Gene ID: 127138364, updated on 23-Nov-2023

Summary

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Gene symbol
LOC127138364
Gene description
probable beta-1,3-galactosyltransferase 2
Locus tag
KIW84_040179
Gene type
protein coding
RefSeq status
MODEL
Organism
Pisum sativum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Fabeae; Pisum
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Genomic context

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See LOC127138364 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
11
Annotation release Status Assembly Chr Location
100 current CAAS_Psat_ZW6_1.0 (GCF_024323335.1) 4 NC_066582.1 (10274918..10280121, complement)

Chromosome 4 - NC_066582.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC127138363 Neighboring gene small nucleolar RNA R71 Neighboring gene uncharacterized LOC127138365 Neighboring gene tRNA wybutosine-synthesizing protein 2/3/4

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_066582.1 Chromosome 4 Reference CAAS_Psat_ZW6_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hexosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable beta-1,3-galactosyltransferase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pisum sativum Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CAAS_Psat_ZW6_1.0

Genomic

  1. NC_066582.1 Reference CAAS_Psat_ZW6_1.0

    Range
    10274918..10280121 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_051064798.1 → XP_050920755.1  probable beta-1,3-galactosyltransferase 2

    UniProtKB/TrEMBL
    A0A9D5AJR9
Nucleotide Protein
Heading Accession and Version

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