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LOC127133875 rhamnogalacturonan I rhamnosyltransferase 1-like [ Pisum sativum (garden pea) ]

Gene ID: 127133875, updated on 23-Nov-2023

Summary

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Gene symbol
LOC127133875
Gene description
rhamnogalacturonan I rhamnosyltransferase 1-like
Locus tag
KIW84_013511
Gene type
protein coding
RefSeq status
MODEL
Organism
Pisum sativum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Fabeae; Pisum
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Genomic context

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See LOC127133875 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
8
Annotation release Status Assembly Chr Location
100 current CAAS_Psat_ZW6_1.0 (GCF_024323335.1) 1 NC_066579.1 (327189141..327192771, complement)

Chromosome 1 - NC_066579.1Genomic Context describing neighboring genes Neighboring gene flavonol 3-O-glucosyltransferase UGT89B1 Neighboring gene uncharacterized LOC127133864 Neighboring gene small nucleolar RNA R71 Neighboring gene uncharacterized LOC127105085

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_066579.1 Chromosome 1 Reference CAAS_Psat_ZW6_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
rhamnogalacturonan I rhamnosyltransferase 1-like
Names
Rhamnogalacturonan I rhamnosyltransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pisum sativum Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CAAS_Psat_ZW6_1.0

Genomic

  1. NC_066579.1 Reference CAAS_Psat_ZW6_1.0

    Range
    327189141..327192771 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_051061766.1 → XP_050917723.1  rhamnogalacturonan I rhamnosyltransferase 1-like

    UniProtKB/TrEMBL
    A0A9D5GXY1
Nucleotide Protein
Heading Accession and Version

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