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LOC127133097 sucrose synthase 7-like [ Pisum sativum (garden pea) ]

Gene ID: 127133097, updated on 10-Oct-2024

Summary

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Gene symbol
LOC127133097
Gene description
sucrose synthase 7-like
Locus tag
KIW84_013451
Gene type
protein coding
RefSeq status
MODEL
Organism
Pisum sativum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Fabeae; Pisum
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Genomic context

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See LOC127133097 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
13
Annotation release Status Assembly Chr Location
100 current CAAS_Psat_ZW6_1.0 (GCF_024323335.1) 1 NC_066579.1 (318089756..318094432)

Chromosome 1 - NC_066579.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC127104828 Neighboring gene small nucleolar RNA R71 Neighboring gene uncharacterized LOC127133113 Neighboring gene uncharacterized LOC127133160 Neighboring gene probable cyclic nucleotide-gated ion channel 20, chloroplastic

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_066579.1 Chromosome 1 Reference CAAS_Psat_ZW6_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Comprehensive transcriptome analysis of the highly complex Pisum sativum genome using next generation sequencing. Franssen SU, et al. BMC Genomics, 2011 May 11. PMID 21569327, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables sucrose synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in sucrose metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sucrose synthase 7-like
Names
Sucrose synthase 6
variant 2, Sucrose synthase 6
variant 3, Sucrose synthase 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pisum sativum Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CAAS_Psat_ZW6_1.0

Genomic

  1. NC_066579.1 Reference CAAS_Psat_ZW6_1.0

    Range
    318089756..318094432
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_051061716.1 → XP_050917673.1  sucrose synthase 7-like

    UniProtKB/TrEMBL
    A0A9D5BK54
Nucleotide Protein
Heading Accession and Version

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