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LOC127125558 nuclear transcription factor Y subunit A-10-like [ Pisum sativum (garden pea) ]

Gene ID: 127125558, updated on 23-Nov-2023

Summary

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Gene symbol
LOC127125558
Gene description
nuclear transcription factor Y subunit A-10-like
Locus tag
KIW84_031196
Gene type
protein coding
RefSeq status
MODEL
Organism
Pisum sativum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Fabeae; Pisum
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Genomic context

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See LOC127125558 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
7
Annotation release Status Assembly Chr Location
100 current CAAS_Psat_ZW6_1.0 (GCF_024323335.1) 3 NC_066581.1 (91214110..91217976)

Chromosome 3 - NC_066581.1Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA R71 Neighboring gene small nucleolar RNA R71 Neighboring gene uncharacterized LOC127129848 Neighboring gene 33 kDa ribonucleoprotein, chloroplastic-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_066581.1 Chromosome 3 Reference CAAS_Psat_ZW6_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Transcriptome sequencing for high throughput SNP development and genetic mapping in Pea. Duarte J, et al. BMC Genomics, 2014 Feb 12. PMID 24521263, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
nuclear transcription factor Y subunit A-10-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pisum sativum Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CAAS_Psat_ZW6_1.0

Genomic

  1. NC_066581.1 Reference CAAS_Psat_ZW6_1.0

    Range
    91214110..91217976
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_051054336.1 → XP_050910293.1  nuclear transcription factor Y subunit A-10-like

    UniProtKB/TrEMBL
    A0A9D4XRP2

  2. XM_051054337.1 → XP_050910294.1  nuclear transcription factor Y subunit A-10-like

    UniProtKB/TrEMBL
    A0A9D4XRP2
Nucleotide Protein
Heading Accession and Version

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