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LOC127119725 uncharacterized LOC127119725 [ Pisum sativum (garden pea) ]

Gene ID: 127119725, updated on 23-Nov-2023

Summary

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Gene symbol
LOC127119725
Gene description
uncharacterized LOC127119725
Locus tag
KIW84_023941
Gene type
protein coding
RefSeq status
MODEL
Organism
Pisum sativum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Fabeae; Pisum
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Genomic context

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See LOC127119725 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
10
Annotation release Status Assembly Chr Location
100 current CAAS_Psat_ZW6_1.0 (GCF_024323335.1) 2 NC_066580.1 (403229806..403235381)

Chromosome 2 - NC_066580.1Genomic Context describing neighboring genes Neighboring gene phosphoenolpyruvate carboxykinase (ATP) 1-like Neighboring gene uncharacterized LOC127121480 Neighboring gene probable starch synthase 4, chloroplastic/amyloplastic Neighboring gene probable starch synthase 4, chloroplastic/amyloplastic Neighboring gene polygalacturonase-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_066580.1 Chromosome 2 Reference CAAS_Psat_ZW6_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Transcriptome sequencing for high throughput SNP development and genetic mapping in Pea. Duarte J, et al. BMC Genomics, 2014 Feb 12. PMID 24521263, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables histone binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in nucleosome assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uncharacterized protein LOC127119725

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pisum sativum Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CAAS_Psat_ZW6_1.0

Genomic

  1. NC_066580.1 Reference CAAS_Psat_ZW6_1.0

    Range
    403229806..403235381
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_051050030.1 → XP_050905987.1  uncharacterized protein LOC127119725

    UniProtKB/TrEMBL
    A0A9D4YK56
Nucleotide Protein
Heading Accession and Version

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