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LOC127098678 granule-bound starch synthase 1, chloroplastic/amyloplastic [ Pisum sativum (garden pea) ]

Gene ID: 127098678, updated on 10-Oct-2024

Summary

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Gene symbol
LOC127098678
Gene description
granule-bound starch synthase 1, chloroplastic/amyloplastic
Locus tag
KIW84_061429
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Pisum sativum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Fabeae; Pisum
Also known as
lam; GBSS-I
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Genomic context

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See LOC127098678 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
14
Annotation release Status Assembly Chr Location
100 current CAAS_Psat_ZW6_1.0 (GCF_024323335.1) 6 NC_066584.1 (60093974..60097839)

Chromosome 6 - NC_066584.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC127098149 Neighboring gene uncharacterized LOC127094015 Neighboring gene glucan endo-1,3-beta-glucosidase 11 Neighboring gene ubiquitin carboxyl-terminal hydrolase 9-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_066584.1 Chromosome 6 Reference CAAS_Psat_ZW6_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Characterization of cDNAs encoding two isoforms of granule-bound starch synthase which show differential expression in developing storage organs of pea and potato. Dry I, et al. Plant J, 1992 Mar. PMID 1302049
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-1,4-glucan glucosyltransferase (UDP-glucose donor) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
granule-bound starch synthase 1, chloroplastic/amyloplastic
Names
Granule-bound starch synthase I
glycogen (starch) synthase
granule bound starch synthase
XP_050893293.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001426979.1 → NP_001413908.1  granule-bound starch synthase 1, chloroplastic/amyloplastic

    Status: VALIDATED

    Source sequence(s)
    GDJU01000700, GDTM01000895, GEZC01000954, GHVW02015550, X88789
    UniProtKB/TrEMBL
    A0A9D4W5M6

RefSeqs of Annotated Genomes: Pisum sativum Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CAAS_Psat_ZW6_1.0

Genomic

  1. NC_066584.1 Reference CAAS_Psat_ZW6_1.0

    Range
    60093974..60097839
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_051037336.1 → XP_050893293.1  granule-bound starch synthase 1, chloroplastic/amyloplastic

Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q43092.1 GenPept UniProtKB/Swiss-Prot:Q43092

Gene LinkOut

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Molecular Biology Databases