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LOC127098557 inositol phosphorylceramide glucuronosyltransferase 1-like [ Pisum sativum (garden pea) ]

Gene ID: 127098557, updated on 23-Nov-2023

Summary

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Gene symbol
LOC127098557
Gene description
inositol phosphorylceramide glucuronosyltransferase 1-like
Locus tag
KIW84_063903
Gene type
protein coding
RefSeq status
MODEL
Organism
Pisum sativum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Fabeae; Pisum
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Genomic context

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See LOC127098557 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
10
Annotation release Status Assembly Chr Location
100 current CAAS_Psat_ZW6_1.0 (GCF_024323335.1) 6 NC_066584.1 (315031604..315035909)

Chromosome 6 - NC_066584.1Genomic Context describing neighboring genes Neighboring gene leucine-rich repeat receptor-like protein kinase PXL1 Neighboring gene small nucleolar RNA R71 Neighboring gene bifunctional TH2 protein, mitochondrial Neighboring gene small nucleolar RNA R71

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_066584.1 Chromosome 6 Reference CAAS_Psat_ZW6_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Transcriptome sequencing for high throughput SNP development and genetic mapping in Pea. Duarte J, et al. BMC Genomics, 2014 Feb 12. PMID 24521263, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
inositol phosphorylceramide glucuronosyltransferase 1-like
Names
Inositol phosphorylceramide glucuronosyltransferase 1
variant 2, Inositol phosphorylceramide glucuronosyltransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pisum sativum Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CAAS_Psat_ZW6_1.0

Genomic

  1. NC_066584.1 Reference CAAS_Psat_ZW6_1.0

    Range
    315031604..315035909
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_051037173.1 → XP_050893130.1  inositol phosphorylceramide glucuronosyltransferase 1-like

    UniProtKB/TrEMBL
    A0A9D5A7E0
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases