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LOC127091696 putative UDP-glucuronate:xylan alpha-glucuronosyltransferase 3 [ Pisum sativum (garden pea) ]

Gene ID: 127091696, updated on 10-Oct-2024

Summary

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Gene symbol
LOC127091696
Gene description
putative UDP-glucuronate:xylan alpha-glucuronosyltransferase 3
Locus tag
KIW84_061122
Gene type
protein coding
RefSeq status
MODEL
Organism
Pisum sativum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Fabeae; Pisum
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Genomic context

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See LOC127091696 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
4
Annotation release Status Assembly Chr Location
100 current CAAS_Psat_ZW6_1.0 (GCF_024323335.1) 6 NC_066584.1 (43171725..43175914)

Chromosome 6 - NC_066584.1Genomic Context describing neighboring genes Neighboring gene ATP-dependent DNA helicase PIF1-like Neighboring gene nuclear transcription factor Y subunit B-1-like Neighboring gene protein TRACHEARY ELEMENT DIFFERENTIATION-RELATED 7-like Neighboring gene stearoyl-[acyl-carrier-protein] 9-desaturase 6, chloroplastic-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_066584.1 Chromosome 6 Reference CAAS_Psat_ZW6_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Transcriptome sequencing for high throughput SNP development and genetic mapping in Pea. Duarte J, et al. BMC Genomics, 2014 Feb 12. PMID 24521263, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in xylan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
putative UDP-glucuronate:xylan alpha-glucuronosyltransferase 3
Names
variant 2, putative UDP-glucuronate:xylan alpha-glucuronosyltransferase 3
variant 3, putative UDP-glucuronate:xylan alpha-glucuronosyltransferase 3
variant 4, putative UDP-glucuronate:xylan alpha-glucuronosyltransferase 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pisum sativum Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CAAS_Psat_ZW6_1.0

Genomic

  1. NC_066584.1 Reference CAAS_Psat_ZW6_1.0

    Range
    43171725..43175914
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_051030381.1 → XP_050886338.1  putative UDP-glucuronate:xylan alpha-glucuronosyltransferase 3

    UniProtKB/TrEMBL
    A0A9D4W442
Nucleotide Protein
Heading Accession and Version

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