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SMPDL3B sphingomyelin phosphodiesterase acid like 3B [ Gymnogyps californianus (California condor) ]

Gene ID: 127025068, updated on 3-Aug-2024

Summary

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Gene symbol
SMPDL3B
Gene description
sphingomyelin phosphodiesterase acid like 3B
Gene type
protein coding
RefSeq status
MODEL
Organism
Gymnogyps californianus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Accipitrimorphae; Accipitriformes; Cathartidae; Gymnogyps
Orthologs
human mouse all
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Genomic context

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See SMPDL3B in Genome Data Viewer
Location:
chromosome: 22
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2023_02 current ASM1813914v2 (GCF_018139145.2) 22 NC_059492.1 (463488..470550, complement)

Chromosome 22 - NC_059492.1Genomic Context describing neighboring genes Neighboring gene EYA transcriptional coactivator and phosphatase 3 Neighboring gene XK related 8 Neighboring gene replication protein A2 Neighboring gene thymocyte selection associated family member 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_059492.1 Chromosome 22 Reference ASM1813914v2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables sphingomyelin phosphodiesterase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in sphingomyelin catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: acid sphingomyelinase-like phosphodiesterase 3b

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_018139145.2-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1813914v2

Genomic

  1. NC_059492.1 Reference ASM1813914v2

    Range
    463488..470550 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_050909870.1 → XP_050765827.1  LOW QUALITY PROTEIN: acid sphingomyelinase-like phosphodiesterase 3b

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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