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ST3GAL6 ST3 beta-galactoside alpha-2,3-sialyltransferase 6 [ Gymnogyps californianus (California condor) ]

Gene ID: 127024054, updated on 3-Aug-2024

Summary

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Gene symbol
ST3GAL6
Gene description
ST3 beta-galactoside alpha-2,3-sialyltransferase 6
Gene type
protein coding
RefSeq status
MODEL
Organism
Gymnogyps californianus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Accipitrimorphae; Accipitriformes; Cathartidae; Gymnogyps
Orthologs
human mouse all
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Genomic context

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See ST3GAL6 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
13
Annotation release Status Assembly Chr Location
RS_2023_02 current ASM1813914v2 (GCF_018139145.2) 1 NC_059471.1 (125375944..125424754, complement)

Chromosome 1 - NC_059471.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC127015488 Neighboring gene collagen type VIII alpha 1 chain Neighboring gene transfer RNA aspartic acid (anticodon GUC) Neighboring gene coproporphyrinogen oxidase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_059471.1 Chromosome 1 Reference ASM1813914v2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables beta-galactoside alpha-2,3-sialyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycolipid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
type 2 lactosamine alpha-2,3-sialyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_018139145.2-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1813914v2

Genomic

  1. NC_059471.1 Reference ASM1813914v2

    Range
    125375944..125424754 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_050908471.1 → XP_050764428.1  type 2 lactosamine alpha-2,3-sialyltransferase isoform X1

  2. XM_050908489.1 → XP_050764446.1  type 2 lactosamine alpha-2,3-sialyltransferase isoform X2

  3. XM_050908497.1 → XP_050764454.1  type 2 lactosamine alpha-2,3-sialyltransferase isoform X3

  4. XM_050908462.1 → XP_050764419.1  type 2 lactosamine alpha-2,3-sialyltransferase isoform X1

  5. XM_050908480.1 → XP_050764437.1  type 2 lactosamine alpha-2,3-sialyltransferase isoform X1

Nucleotide Protein
Heading Accession and Version

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