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LOC127009622 protein O-linked-mannose beta-1,2-N-acetylglucosaminyltransferase 1-like [ Eriocheir sinensis (Chinese mitten crab) ]

Gene ID: 127009622, updated on 23-Nov-2023

Summary

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Gene symbol
LOC127009622
Gene description
protein O-linked-mannose beta-1,2-N-acetylglucosaminyltransferase 1-like
See related
EnsemblRapid:LOC127009622
Gene type
protein coding
RefSeq status
MODEL
Organism
Eriocheir sinensis
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Crustacea; Multicrustacea; Malacostraca; Eumalacostraca; Eucarida; Decapoda; Pleocyemata; Brachyura; Eubrachyura; Grapsoidea; Varunidae; Eriocheir
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Genomic context

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See LOC127009622 in Genome Data Viewer
Location:
chromosome: 41
Exon count:
14
Annotation release Status Assembly Chr Location
100 current ASM2467909v1 (GCF_024679095.1) 41 NC_066549.1 (9028681..9036948, complement)

Chromosome 41 - NC_066549.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC127009749 Neighboring gene uncharacterized LOC127009620 Neighboring gene protein O-linked-mannose beta-1,2-N-acetylglucosaminyltransferase 1-like Neighboring gene uncharacterized LOC127009750 Neighboring gene PR domain zinc finger protein 8-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_066549.1 Chromosome 41 Reference ASM2467909v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Comparative transcriptomic analysis provides insights into the molecular basis of the metamorphosis and nutrition metabolism change from zoeae to megalopae in Eriocheir sinensis. Li Y, et al. Comp Biochem Physiol Part D Genomics Proteomics, 2015 Mar. PMID 25460100
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,3-N-acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in O-glycan processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein O-linked-mannose beta-1,2-N-acetylglucosaminyltransferase 1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Eriocheir sinensis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2467909v1

Genomic

  1. NC_066549.1 Reference ASM2467909v1

    Range
    9028681..9036948 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_050882851.1 → XP_050738808.1  protein O-linked-mannose beta-1,2-N-acetylglucosaminyltransferase 1-like isoform X1

    Related
    XP_050738808.1, XM_050882851.1

  2. XM_050882852.1 → XP_050738809.1  protein O-linked-mannose beta-1,2-N-acetylglucosaminyltransferase 1-like isoform X2

    Related
    XP_050738809.1, XM_050882852.1
Nucleotide Protein
Heading Accession and Version

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