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LOC126997583 delta-sarcoglycan-like [ Eriocheir sinensis (Chinese mitten crab) ]

Gene ID: 126997583, updated on 23-Nov-2023

Summary

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Gene symbol
LOC126997583
Gene description
delta-sarcoglycan-like
See related
EnsemblRapid:LOC126997583
Gene type
protein coding
RefSeq status
MODEL
Organism
Eriocheir sinensis
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Crustacea; Multicrustacea; Malacostraca; Eumalacostraca; Eucarida; Decapoda; Pleocyemata; Brachyura; Eubrachyura; Grapsoidea; Varunidae; Eriocheir
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Genomic context

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See LOC126997583 in Genome Data Viewer
Location:
chromosome: 12
Exon count:
6
Annotation release Status Assembly Chr Location
100 current ASM2467909v1 (GCF_024679095.1) 12 NC_066520.1 (20125027..20175559, complement)

Chromosome 12 - NC_066520.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC126997582 Neighboring gene transfer RNA threonine (anticodon AGU) Neighboring gene uncharacterized LOC126997580 Neighboring gene uncharacterized LOC126997755 Neighboring gene uridine diphosphate glucose pyrophosphatase NUDT22-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_066520.1 Chromosome 12 Reference ASM2467909v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Comparative transcriptomic analysis provides insights into the molecular basis of the metamorphosis and nutrition metabolism change from zoeae to megalopae in Eriocheir sinensis. Li Y, et al. Comp Biochem Physiol Part D Genomics Proteomics, 2015 Mar. PMID 25460100
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cardiac muscle tissue development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in heart contraction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of sarcoglycan complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in sarcolemma IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
delta-sarcoglycan-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Eriocheir sinensis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2467909v1

Genomic

  1. NC_066520.1 Reference ASM2467909v1

    Range
    20125027..20175559 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_050858752.1 → XP_050714709.1  delta-sarcoglycan-like

    Related
    XP_050714709.1, XM_050858752.1
Nucleotide Protein
Heading Accession and Version

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