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LOC126981223 acetylcholine receptor subunit alpha-type acr-16-like [ Eriocheir sinensis (Chinese mitten crab) ]

Gene ID: 126981223, updated on 23-Nov-2023

Summary

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Gene symbol
LOC126981223
Gene description
acetylcholine receptor subunit alpha-type acr-16-like
See related
EnsemblRapid:LOC126981223
Gene type
protein coding
RefSeq status
MODEL
Organism
Eriocheir sinensis
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Crustacea; Multicrustacea; Malacostraca; Eumalacostraca; Eucarida; Decapoda; Pleocyemata; Brachyura; Eubrachyura; Grapsoidea; Varunidae; Eriocheir
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Genomic context

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See LOC126981223 in Genome Data Viewer
Location:
chromosome: 47
Exon count:
12
Annotation release Status Assembly Chr Location
100 current ASM2467909v1 (GCF_024679095.1) 47 NC_066555.1 (726406..747359)

Chromosome 47 - NC_066555.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC126981217 Neighboring gene uncharacterized LOC126981222 Neighboring gene adaptor related protein complex 3 subunit ruby Neighboring gene uncharacterized LOC126981226 Neighboring gene uncharacterized LOC126981225 Neighboring gene synaptic vesicle glycoprotein 2C-like Neighboring gene metabotropic glutamate receptor 5-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_066555.1 Chromosome 47 Reference ASM2467909v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables extracellular ligand-gated monoatomic ion channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables neurotransmitter receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transmembrane signaling receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chemical synaptic transmission IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in monoatomic ion transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in nervous system process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of membrane potential IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in neuron projection IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in synapse IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
acetylcholine receptor subunit alpha-type acr-16-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Eriocheir sinensis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2467909v1

Genomic

  1. NC_066555.1 Reference ASM2467909v1

    Range
    726406..747359
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_050832080.1 → XP_050688037.1  acetylcholine receptor subunit alpha-type acr-16-like

    Related
    XP_050688037.1, XM_050832080.1

RNA

  1. XR_007733823.1 RNA Sequence

    Related
    XR_007733823.1

  2. XR_007733821.1 RNA Sequence

    Related
    XR_007733821.1

  3. XR_007733824.1 RNA Sequence

    Related
    XR_007733824.1

  4. XR_007733826.1 RNA Sequence

    Related
    XR_007733826.1

  5. XR_007733830.1 RNA Sequence

    Related
    XR_007733830.1

  6. XR_007733825.1 RNA Sequence

    Related
    XR_007733825.1

  7. XR_007733828.1 RNA Sequence

    Related
    XR_007733828.1

  8. XR_007733831.1 RNA Sequence

    Related
    XR_007733831.1

  9. XR_007733827.1 RNA Sequence

    Related
    XR_007733827.1

  10. XR_007733833.1 RNA Sequence

    Related
    XR_007733833.1

  11. XR_007733836.1 RNA Sequence

    Related
    XR_007733836.1

  12. XR_007733835.1 RNA Sequence

    Related
    XR_007733835.1

  13. XR_007733832.1 RNA Sequence

    Related
    XR_007733832.1

  14. XR_007733829.1 RNA Sequence

    Related
    XR_007733829.1

  15. XR_007733838.1 RNA Sequence

    Related
    XR_007733838.1

  16. XR_007733834.1 RNA Sequence

    Related
    XR_007733834.1

  17. XR_007733839.1 RNA Sequence

    Related
    XR_007733839.1

  18. XR_007733837.1 RNA Sequence

    Related
    XR_007733837.1

  19. XR_007733840.1 RNA Sequence

    Related
    XR_007733840.1
Nucleotide Protein
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