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CSGALNACT2 chondroitin sulfate N-acetylgalactosaminyltransferase 2 [ Macaca thibetana thibetana ]

Gene ID: 126962794, updated on 24-Mar-2024

Summary

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Gene symbol
CSGALNACT2
Gene description
chondroitin sulfate N-acetylgalactosaminyltransferase 2
See related
EnsemblRapid:ENSMTBG00000017055
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca thibetana thibetana (sub-species: thibetana)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See CSGALNACT2 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2023_02 current ASM2454274v1 (GCF_024542745.1) 9 NC_065586.1 (41782375..41829081, complement)

Chromosome 9 - NC_065586.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC126962820 Neighboring gene RasGEF domain family member 1A Neighboring gene ret proto-oncogene Neighboring gene NADH-ubiquinone oxidoreductase chain 5-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_065586.1 Chromosome 9 Reference ASM2454274v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chondroitin sulfate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi cisterna membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
chondroitin sulfate N-acetylgalactosaminyltransferase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_024542745.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2454274v1

Genomic

  1. NC_065586.1 Reference ASM2454274v1

    Range
    41782375..41829081 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_050804309.1 → XP_050660266.1  chondroitin sulfate N-acetylgalactosaminyltransferase 2 isoform X1

  2. XM_050804308.1 → XP_050660265.1  chondroitin sulfate N-acetylgalactosaminyltransferase 2 isoform X1

    Related
    ENSMTBP00000023381.1, ENSMTBT00000029249.1

  3. XM_050804310.1 → XP_050660267.1  chondroitin sulfate N-acetylgalactosaminyltransferase 2 isoform X2

    Related
    ENSMTBP00000023379.1, ENSMTBT00000029247.1

  4. XM_050804312.1 → XP_050660269.1  chondroitin sulfate N-acetylgalactosaminyltransferase 2 isoform X4

    Related
    ENSMTBP00000023371.1, ENSMTBT00000029239.1

  5. XM_050804311.1 → XP_050660268.1  chondroitin sulfate N-acetylgalactosaminyltransferase 2 isoform X3

    Related
    ENSMTBP00000023368.1, ENSMTBT00000029236.1

RNA

  1. XR_007728803.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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