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SDC2 syndecan 2 [ Macaca thibetana thibetana ]

Gene ID: 126960837, updated on 24-Mar-2024

Summary

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Gene symbol
SDC2
Gene description
syndecan 2
See related
EnsemblRapid:ENSMTBG00000019809
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca thibetana thibetana (sub-species: thibetana)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See SDC2 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2023_02 current ASM2454274v1 (GCF_024542745.1) 8 NC_065585.1 (48515212..48631749, complement)

Chromosome 8 - NC_065585.1Genomic Context describing neighboring genes Neighboring gene cytochrome b-c1 complex subunit 7 Neighboring gene uncharacterized LOC126960862 Neighboring gene TSPY like 5 Neighboring gene 60S ribosomal protein L10a-like Neighboring gene carboxypeptidase Q Neighboring gene U6 spliceosomal RNA Neighboring gene small integral membrane protein 15-like Neighboring gene cilia and flagella associated protein 418

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_065585.1 Chromosome 8 Reference ASM2454274v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cell migration IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in dendrite morphogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell surface IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
syndecan-2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_024542745.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2454274v1

Genomic

  1. NC_065585.1 Reference ASM2454274v1

    Range
    48515212..48631749 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_050800555.1 → XP_050656512.1  syndecan-2

    Related
    ENSMTBP00000027169.1, ENSMTBT00000033873.1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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