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SGCD sarcoglycan delta [ Macaca thibetana thibetana ]

Gene ID: 126956744, updated on 24-Mar-2024

Summary

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Gene symbol
SGCD
Gene description
sarcoglycan delta
See related
EnsemblRapid:ENSMTBG00000018861
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca thibetana thibetana (sub-species: thibetana)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See SGCD in Genome Data Viewer
Location:
chromosome: 6
Exon count:
10
Annotation release Status Assembly Chr Location
RS_2023_02 current ASM2454274v1 (GCF_024542745.1) 6 NC_065583.1 (24902443..25328549, complement)

Chromosome 6 - NC_065583.1Genomic Context describing neighboring genes Neighboring gene MICOS complex subunit MIC26-like Neighboring gene U6 spliceosomal RNA Neighboring gene T cell immunoglobulin and mucin domain containing 4 Neighboring gene peptidyl-prolyl cis-trans isomerase G-like Neighboring gene CST complex subunit STN1-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_065583.1 Chromosome 6 Reference ASM2454274v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cardiac muscle tissue development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in heart contraction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of sarcoglycan complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in sarcolemma IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
delta-sarcoglycan

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_024542745.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2454274v1

Genomic

  1. NC_065583.1 Reference ASM2454274v1

    Range
    24902443..25328549 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_050793959.1 → XP_050649916.1  delta-sarcoglycan isoform X2

  2. XM_050793958.1 → XP_050649915.1  delta-sarcoglycan isoform X1

    Related
    ENSMTBP00000025899.1, ENSMTBT00000032335.1

  3. XM_050793960.1 → XP_050649917.1  delta-sarcoglycan isoform X3

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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