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Cbl E3 ubiquitin-protein ligase CBL [ Adelges cooleyi (spruce gall adelgid) ]

Gene ID: 126842110, updated on 23-May-2024

Summary

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Gene symbol
Cbl
Gene description
E3 ubiquitin-protein ligase CBL
See related
EnsemblRapid:LOC126842110
Gene type
protein coding
RefSeq status
MODEL
Organism
Adelges cooleyi
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Paraneoptera; Hemiptera; Sternorrhyncha; Aphidomorpha; Phylloxeroidea; Adelgidae; Adelges; Gilletteella
Orthologs
fruit fly all
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Genomic context

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See Cbl in Genome Data Viewer
Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
100 current UGA_ACOO_1.1 (GCF_023614345.1) Unplaced Scaffold NW_026096129.1 (39812..45584, complement)

NW_026096129.1Genomic Context describing neighboring genes Neighboring gene mitochondrial import inner membrane translocase subunit TIM44 Neighboring gene pre-mRNA splicing factor crn Neighboring gene dedicator of cytokinesis protein Ziz Neighboring gene transcription initiation factor IIB-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_026096129 Unplaced Scaffold Reference UGA_ACOO_1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables SH3 domain binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phosphotyrosine residue binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables receptor tyrosine kinase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ubiquitin protein ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell surface receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of epidermal growth factor-activated receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane raft IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
E3 ubiquitin-protein ligase CBL-B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Adelges cooleyi Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UGA_ACOO_1.1

Genomic

  1. NW_026096129.1 Reference UGA_ACOO_1.1

    Range
    39812..45584 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_050578992.1 → XP_050434949.1  E3 ubiquitin-protein ligase CBL-B

    Related
    XP_050434949.1, XM_050578992.1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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