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LOC126829639 high affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A [ Patella vulgata (common limpet) ]

Gene ID: 126829639, updated on 16-Nov-2023

Summary

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Gene symbol
LOC126829639
Gene description
high affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A
See related
EnsemblRapid:ENSPVUG00005009101
Gene type
protein coding
RefSeq status
MODEL
Organism
Patella vulgata
Lineage
Eukaryota; Metazoa; Spiralia; Lophotrochozoa; Mollusca; Gastropoda; Patellogastropoda; Patelloidea; Patellidae; Patella
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Genomic context

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See LOC126829639 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
18
Annotation release Status Assembly Chr Location
RS_2023_05 current xgPatVulg1.2 (GCF_932274485.2) 8 NC_065886.2 (49373672..49416051)
100 previous assembly xgPatVulg1.1 (GCF_932274485.1) 8 NC_065886.1 (5552290..5594670, complement)

Chromosome 8 - NC_065886.2Genomic Context describing neighboring genes Neighboring gene transcription factor Sp9 Neighboring gene cell adhesion molecule-related/down-regulated by oncogenes Neighboring gene 40S ribosomal protein S19 Neighboring gene unhealthy ribosome biogenesis protein 2 homolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 3',5'-cyclic-GMP phosphodiesterase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cGMP catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cGMP-mediated signaling IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
high affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_932274485.2-RS_2023_05

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference xgPatVulg1.2

Genomic

  1. NC_065886.2 Reference xgPatVulg1.2

    Range
    49373672..49416051
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_050559638.2 → XP_050415595.1  high affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A isoform X2

    Related
    ENSPVUP00005011519.1

  2. XM_050559637.2 → XP_050415594.1  high affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A isoform X1

  3. XM_050559639.1 → XP_050415596.1  high affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A isoform X3

  4. XM_050559641.1 → XP_050415598.1  high affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A isoform X4

    Related
    ENSPVUP00005011490.1, ENSPVUT00005013904.1
Nucleotide Protein
Heading Accession and Version

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