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LOC126826982 host cell factor 1 [ Patella vulgata (common limpet) ]

Gene ID: 126826982, updated on 16-Nov-2023

Summary

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Gene symbol
LOC126826982
Gene description
host cell factor 1
See related
EnsemblRapid:ENSPVUG00005020122
Gene type
protein coding
RefSeq status
MODEL
Organism
Patella vulgata
Lineage
Eukaryota; Metazoa; Spiralia; Lophotrochozoa; Mollusca; Gastropoda; Patellogastropoda; Patelloidea; Patellidae; Patella
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Genomic context

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See LOC126826982 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
18
Annotation release Status Assembly Chr Location
RS_2023_05 current xgPatVulg1.2 (GCF_932274485.2) 7 NC_065885.2 (25945253..25959614)
100 previous assembly xgPatVulg1.1 (GCF_932274485.1) 7 NC_065885.1 (43343471..43359089, complement)

Chromosome 7 - NC_065885.2Genomic Context describing neighboring genes Neighboring gene histone H1-delta-like Neighboring gene ER membrane protein complex subunit 7 Neighboring gene transmembrane protein 187 Neighboring gene uncharacterized LOC126827428 Neighboring gene ubiquitin-like modifier-activating enzyme ATG7

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription coactivator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chromatin remodeling IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of histone methyltransferase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
host cell factor 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_932274485.2-RS_2023_05

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference xgPatVulg1.2

Genomic

  1. NC_065885.2 Reference xgPatVulg1.2

    Range
    25945253..25959614
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_056102266.1 → XP_055958241.1  host cell factor 1

Nucleotide Protein
Heading Accession and Version

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